Bioinformatics Algorithms: An Active Learning Approach | Poke

Bioinformatics Algorithms: An Active Learning Approach @UCKSUVRs2N2FdDNvQoRWKhoQ@youtube.com

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The lectures accompanying Bioinformatics Algorithms: An Acti

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Toward a Computational Problem for Genome Sequencing

Genome Sequencing Meets Alice

A Killer Bacterial Strain

Waiting for an HIV Vaccine

The Air Force Secret Report

Introduction to "Genome Sequencing"

Introduction to "Molecular Evolution"

Introduction to "Comparing Genes, Proteins, and Genomes"

Introduction to "Finding Mutations in DNA and Proteins"

Introduction to "Genomic Data Science and Clustering"

Introduction to "Finding Hidden Messages in DNA"

Welcome to the Bioinformatics Specialization!

From Implanted Patterns to Regulatory Motifs (Part 2)

Spectral Alignment Algorithm

Searching for Post-Translational Modifications

The Ostrich Hemoglobin Riddle

Spectral Dictionaries

Peptide Identification

Peptide Sequencing

From Ideal to Real Spectra

Decoding an Ideal Spectrum

Paleontology Meets Computing

Baum-Welch Learning

Soft Decoding Problem

Viterbi Learning

Classifying Proteins with Profile HMMs

Profile HMMs for Sequence Alignment

The Viterbi Algorithm

The Decoding Problem

From a Crooked Casino to a Hidden Markov Model

Gambling with Yakuza

Classifying HIV Phenotypes

Gene Expression Matrices

Hierarchical Clustering

Soft k-Means Clustering

Expectation Maximization

From Coin Flipping to k-Means Clustering

From Hard to Soft Clustering

The Lloyd Algorithm for k-Means Clustering

Clustering as an Optimization Problem

Which Yeast Genes are Responsible for Wine-Making?

Evolutionary Tree Reconstruction in the Modern Era

The Large Parsimony Problem

The Small Parsimony Problem

Character-Based Tree Reconstruction

The Neighbor-Joining Algorithm

Ultrametric Trees

Using Least-Squares to Construct Distance-Based Phylogenies

Additive Phylogeny

Toward an Algorithm for Distance-Based Phylogeny Construction

Transforming Distance Matrices into Evolutionary Trees

The Fastest Outbreak

Synteny Block Construction

Rearrangement Hotspots in the Human Genome

Breakpoint Graphs

Rearrangements in Tumor Genomes

Breakpoint Theorem

Sorting by Reversals

Transforming Men into Mice